SMILI Assistant

Publications

Please cite the Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', with the following publication. Your support will allow SMILI to continue in the future.

Chandra, S. S.; Dowling, J. A.; Engstrom, C.; Xia, Y.; Paproki, A.; Neubert, A.; Rivest-Hénault, D.; Salvado, O.; Crozier, S. & Fripp, J.
"A lightweight rapid application development framework for biomedical image analysis"
Computer Methods and Programs in Biomedicine, vol. 164, pp. 193-205, Oct. 2018.
https://doi.org/10.1016/j.cmpb.2018.07.011

It has been utilised in publishing in the following journal articles:

Chandra, S. S.; Dowling, J.; Shen, K.-K.; Raniga, P.; Pluim, J.; Greer, P.; Salvado, O. & Fripp, J.
"Patient Specific Prostate Segmentation in 3-D Magnetic Resonance Images"
Medical Imaging, IEEE Transactions on, 2012, 31, 1955 -1964
https://doi.org/10.1109/TMI.2012.2211377
Chandra, S. S.; Xia, Y.; Engstrom, C.; Crozier, S.; Schwarz, R. & Fripp, J.
"Focused shape models for hip joint segmentation in 3D magnetic resonance images"
Medical Image Analysis , 2014, 18, 567 - 578
http://dx.doi.org/10.1016/j.media.2014.02.002
Chandra, S. S.; Dowling, J. A.; Greer, P.; Martin, J.; Wratten, C.; Pichler, P.; Fripp, J. & Crozier, S.
"Automatic Fast automated segmentation of multiple objects via spatially weighted shape learning"
Physics in Medicine and Biology, 2016, 61, 8070
https://doi.org/10.1088/0031-9155/61/22/8070
Chandra, S. S.; Engstrom, C.; Fripp, J.; Walker, D.; Rose, S.; Ho, C. & Crozier, S.
"Local Contrast Enhanced MR Images via High Dynamic Range Processing"
Magnetic Resonance in Medicine, 2018, 80, 1206-1218
https://doi.org/10.1002/mrm.27109
See also: HDR-MRI Application Framework built using SMILI

Others have also successfuly used SMILI in other areas:

Walker, A.; Liney, G.; Holloway, L.; Dowling, J.; Rivest-Hénault, D. & Metcalfe, P.
"Continuous table acquisition MRI for radiotherapy treatment planning: Distortion assessment with a new extended 3D volumetric phantom"
Medical Physics, 2015, 42, 1982-1991
https://doi.org/10.1118/1.4915920
Walker, A.; Metcalfe, P.; Liney, G.; Batumalai, V.; Dundas, K.; Glide-Hurst, C.; Delaney, G. P.; Boxer, M.; Yap, M. L.; Dowling, J.; Rivest-Hénault, D.; Pogson, E. & Holloway, L.
"MRI geometric distortion: Impact on tangential whole-breast IMRT"
Journal of Applied Clinical Medical Physics, 2016, 17, 7-19
https://doi.org/10.1120/jacmp.v17i5.6242