 |
SMILX
1.01
|
|
SMILX
1.01
|
This is the complete list of members for milx::Registration, including all inherited members.
| ALADIN_AFFINE enum value (defined in milx::Registration) | milx::Registration | |
| ALADIN_DIFFDEMONS enum value (defined in milx::Registration) | milx::Registration | |
| ALADIN_MILXBSPLINE enum value (defined in milx::Registration) | milx::Registration | |
| ALADIN_RIGID enum value (defined in milx::Registration) | milx::Registration | |
| ALIBABA_AFFINE enum value (defined in milx::Registration) | milx::Registration | |
| ALIBABA_RIGID enum value (defined in milx::Registration) | milx::Registration | |
| BsplineInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| BsplineOrientatedInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| ClearAtlases() (defined in milx::Registration) | milx::Registration | inline |
| ClearCases() (defined in milx::Registration) | milx::Registration | inline |
| ClearPropagatedOutputAtlasesLabels() (defined in milx::Registration) | milx::Registration | inline |
| ConfigureRegistration(RegistrationMode, std::string) | milx::Registration | inline |
| ConsensusMode enum name (defined in milx::Registration) | milx::Registration | |
| DemonsDeformationFieldType typedef (defined in milx::Registration) | milx::Registration | |
| DIFFDEMONS enum value (defined in milx::Registration) | milx::Registration | |
| FieldType typedef (defined in milx::Registration) | milx::Registration | |
| FixedImageType typedef (defined in milx::Registration) | milx::Registration | |
| GetAtlasFileName(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetAtlasFileNames() (defined in milx::Registration) | milx::Registration | inline |
| GetAtlasIDs() (defined in milx::Registration) | milx::Registration | inline |
| GetCaseFileName(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetCaseFileName2(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetCaseFileNames() (defined in milx::Registration) | milx::Registration | inline |
| GetCaseFileNames2() (defined in milx::Registration) | milx::Registration | inline |
| GetCaseIDs() (defined in milx::Registration) | milx::Registration | inline |
| GetConsensusMode() (defined in milx::Registration) | milx::Registration | inline |
| GetLabellingFileNames() (defined in milx::Registration) | milx::Registration | inline |
| GetLabellingFileNames(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetLabellingIDs() (defined in milx::Registration) | milx::Registration | inline |
| GetNumberOfAtlases() (defined in milx::Registration) | milx::Registration | inline |
| GetNumberOfCases() | milx::Registration | inline |
| GetNumberOfCases2() (defined in milx::Registration) | milx::Registration | inline |
| GetNumberOfLabellings() (defined in milx::Registration) | milx::Registration | inline |
| GetOutputPrefix() (defined in milx::Registration) | milx::Registration | inline |
| GetPropagatedOutputAtlases() | milx::Registration | inline |
| GetPropagatedOutputAtlases(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetPropagatedOutputLabels() (defined in milx::Registration) | milx::Registration | inline |
| GetPropagatedOutputLabels(int caseID) (defined in milx::Registration) | milx::Registration | inline |
| GetPropagatedOutputTransforms() (defined in milx::Registration) | milx::Registration | inline |
| GetRegistrationMode() (defined in milx::Registration) | milx::Registration | inline |
| GetUseConsensus() (defined in milx::Registration) | milx::Registration | inline |
| InputImageType typedef (defined in milx::Registration) | milx::Registration | |
| InputPixelType typedef (defined in milx::Registration) | milx::Registration | |
| INTERP_BSPLINE enum value (defined in milx::Registration) | milx::Registration | |
| INTERP_BSPLINE5 enum value (defined in milx::Registration) | milx::Registration | |
| INTERP_LINEAR enum value (defined in milx::Registration) | milx::Registration | |
| INTERP_NEAREST enum value (defined in milx::Registration) | milx::Registration | |
| InterpolateMode enum name (defined in milx::Registration) | milx::Registration | |
| ITK_AFFINE enum value (defined in milx::Registration) | milx::Registration | |
| ITK_AFFINE_DIFFDEMONS enum value (defined in milx::Registration) | milx::Registration | |
| ITK_AFFINEBSPLINE enum value (defined in milx::Registration) | milx::Registration | |
| ITK_RIGID enum value (defined in milx::Registration) | milx::Registration | |
| ITKALADIN_DIFFDEMONS enum value (defined in milx::Registration) | milx::Registration | |
| LinearInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| LinearOrientatedInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| LoadSettings(std::string) | milx::Registration | inline |
| LoadTRSF(std::string filename1, std::string filename2, double *array, bool invert) (defined in milx::Registration) | milx::Registration | |
| LoadTRSF(std::string filename, double *array, bool invert) (defined in milx::Registration) | milx::Registration | |
| m_AtlasFilenames (defined in milx::Registration) | milx::Registration | |
| m_AtlasIDs | milx::Registration | |
| m_AtlasInterpolation (defined in milx::Registration) | milx::Registration | |
| m_BsplineInterpolator (defined in milx::Registration) | milx::Registration | |
| m_BsplineOrientatedInterpolator (defined in milx::Registration) | milx::Registration | |
| m_CaseFilenames (defined in milx::Registration) | milx::Registration | |
| m_CaseFilenames2 (defined in milx::Registration) | milx::Registration | |
| m_CaseIDs (defined in milx::Registration) | milx::Registration | |
| m_ConsensusMode (defined in milx::Registration) | milx::Registration | |
| m_LabelledImageInterpolation (defined in milx::Registration) | milx::Registration | |
| m_LabellingFilenames (defined in milx::Registration) | milx::Registration | |
| m_LabellingIDs (defined in milx::Registration) | milx::Registration | |
| m_LinearInterpolator (defined in milx::Registration) | milx::Registration | |
| m_LinearOrientatedInterpolator (defined in milx::Registration) | milx::Registration | |
| m_MaskFilenames (defined in milx::Registration) | milx::Registration | |
| m_MaskFilenames2 (defined in milx::Registration) | milx::Registration | |
| m_MaskIDs (defined in milx::Registration) | milx::Registration | |
| m_MultipleLabelledImageInterpolation (defined in milx::Registration) | milx::Registration | |
| m_NearestNeighborInterpolator | milx::Registration | |
| m_NearestNeighborOrientatedInterpolator (defined in milx::Registration) | milx::Registration | |
| m_OutputPrefix (defined in milx::Registration) | milx::Registration | |
| m_PropagatedAtlases (defined in milx::Registration) | milx::Registration | |
| m_PropagatedLabelling (defined in milx::Registration) | milx::Registration | |
| m_PropagatedTransforms (defined in milx::Registration) | milx::Registration | |
| m_RegistrationInterpolation (defined in milx::Registration) | milx::Registration | |
| m_RegistrationMode (defined in milx::Registration) | milx::Registration | |
| m_SaveFiles (defined in milx::Registration) | milx::Registration | |
| m_UseConsensus (defined in milx::Registration) | milx::Registration | |
| MovingImageType typedef (defined in milx::Registration) | milx::Registration | |
| MULTISTAPLE enum value (defined in milx::Registration) | milx::Registration | |
| NearestNeighborInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| NearestNeighborOrientatedInterpolatorType typedef (defined in milx::Registration) | milx::Registration | |
| NIFTI_ALADIN_REG enum value (defined in milx::Registration) | milx::Registration | |
| NIFTI_REG enum value (defined in milx::Registration) | milx::Registration | |
| NmiITK(std::string dataFile, std::string atlasFile) (defined in milx::Registration) | milx::Registration | |
| OutputImageType typedef (defined in milx::Registration) | milx::Registration | |
| OutputPixelType typedef (defined in milx::Registration) | milx::Registration | |
| PropagateAffine(std::string dataFile, std::string outFile, std::string targetFile, double *array, InterpolateMode mode, itk::SpatialOrientation::ValidCoordinateOrientationFlags &flag, itk::SpatialOrientationAdapter::DirectionType &dir) (defined in milx::Registration) | milx::Registration | |
| PropagateITKAffine(std::string dataFile, std::string outFile, std::string targetFile, std::string transformFile, InterpolateMode mode) (defined in milx::Registration) | milx::Registration | |
| PropagateITKAffineBspline(std::string inputImage, std::string targetFile, std::string outputFilename, std::string inputTransform, std::string inputBsplineTransform, InterpolateMode mode) (defined in milx::Registration) | milx::Registration | |
| PropagateITKRigid(std::string dataFile, std::string outFile, std::string targetFile, std::string transformFile, InterpolateMode mode) (defined in milx::Registration) | milx::Registration | |
| readFile3D(std::string fileName) | milx::Registration | |
| RegisterAffineITK(std::string dataFile, std::string atlasFile, std::string outputPrefix, bool Invert, std::string dataMaskFile, std::string atlasMaskFile) (defined in milx::Registration) | milx::Registration | |
| RegisterMilxNonRigid(std::string dataFile, std::string atlasFile, std::string outputName, bool Invert) (defined in milx::Registration) | milx::Registration | |
| RegisterNonRigidBsplineITK(std::string dataFile, std::string atlasFile, std::string outputPrefix, bool Invert, std::string dataMaskFile, std::string atlasMaskFile) (defined in milx::Registration) | milx::Registration | |
| RegisterRigidITK(std::string dataFile, std::string atlasFile, std::string outputPrefix, bool Invert, std::string dataMaskFile, std::string atlasMaskFile) | milx::Registration | |
| Registration() (defined in milx::Registration) | milx::Registration | |
| RegistrationMode enum name (defined in milx::Registration) | milx::Registration | |
| SetAtlas(int atlasIDs, std::string atlasFilenames) (defined in milx::Registration) | milx::Registration | inline |
| SetAtlas(int atlasIDs, std::string atlasFilenames, std::vector< std::string > labellingFilenames) (defined in milx::Registration) | milx::Registration | inline |
| SetAtlases(std::vector< int > atlasIDs, std::vector< std::string > atlasFilenames) | milx::Registration | inline |
| SetAtlases(std::vector< int > atlasIDs, std::vector< std::string > atlasFilenames, std::vector< int > labellingIDs, std::vector< std::string > labellingFilenames) (defined in milx::Registration) | milx::Registration | inline |
| SetAtlases(std::vector< int > atlasIDs, std::vector< std::string > atlasFilenames, std::vector< int > labellingIDs, std::vector< std::string > labellingFilenames, std::vector< int > maskIDs, std::vector< std::string > maskFilenames) (defined in milx::Registration) | milx::Registration | inline |
| SetAtlases(std::vector< int > atlasIDs, std::vector< std::string > atlasFilenames, std::vector< int > labellingIDs, std::vector< std::string > labellingFilenames, std::vector< int > maskIDs, std::vector< std::string > maskFilenames, std::vector< std::string > maskFilenames2) (defined in milx::Registration) | milx::Registration | inline |
| SetAtlasInterpolation(InterpolateMode mode) (defined in milx::Registration) | milx::Registration | inline |
| SetCase(int caseID, std::string filenames) | milx::Registration | inline |
| SetCasePair(int caseID, std::string filenames, std::string filenames2) (defined in milx::Registration) | milx::Registration | inline |
| SetCases(std::vector< int > caseIDs, std::vector< std::string > caseFilenames) (defined in milx::Registration) | milx::Registration | inline |
| SetCasesPair(std::vector< int > caseIDs, std::vector< std::string > caseFilenames, std::vector< std::string > caseFilenames2) (defined in milx::Registration) | milx::Registration | inline |
| SetConsensusMode(int consensusScheme, std::string configFilename="NULL") | milx::Registration | inline |
| SetConsensusMode(ConsensusMode consensusScheme, std::string) (defined in milx::Registration) | milx::Registration | inline |
| SetFilesToSave(int value) | milx::Registration | inline |
| SetLabelledImageInterpolation(InterpolateMode mode) (defined in milx::Registration) | milx::Registration | inline |
| SetLabelledImageInterpolation(std::vector< InterpolateMode > modes) (defined in milx::Registration) | milx::Registration | inline |
| SetOutputPrefix(std::string prefix) | milx::Registration | inline |
| SetRegistrationInterpolation(InterpolateMode mode) | milx::Registration | inline |
| SetRegistrationMode(int registrationScheme, std::string configFilename="NULL") | milx::Registration | inline |
| SetRegistrationMode(RegistrationMode registrationScheme, std::string) (defined in milx::Registration) | milx::Registration | inline |
| SetUseConsensus(bool flag) | milx::Registration | inline |
| StringToCharArray(std::string &cmdline, char **argument) (defined in milx::Registration) | milx::Registration | |
| UpdatePipeline() | milx::Registration | inline |
| VectorPixelType typedef (defined in milx::Registration) | milx::Registration | |
| VectorType typedef (defined in milx::Registration) | milx::Registration | |
| VOTING enum value (defined in milx::Registration) | milx::Registration | |
| Voting(std::vector< std::string > inputFilenames, std::string outputFilename, int modulo, int N, ConsensusMode consensusMode) (defined in milx::Registration) | milx::Registration | |
| writeFile3D(FixedImageType::Pointer image, std::string outputFileName) | milx::Registration | |
| ~Registration() (defined in milx::Registration) | milx::Registration |
1.8.13